This 1.5-day workshop will include a short introduction to next-generation sequencing theory and an introduction to Galaxy. The hands-on component of the workshop will cover the concepts of de novo assembly and initial annotation of a genome from short-read NGS data.
QFAB offers a wide range of statistical and bioinformatic analyses of microarray data, ranging from design and quality control to samples comparison for differential expression analysis from different conditions, patients and time points:
- Quality Control
- Quantification : gene expression, exon level, copy number…
- Gene ontology
- Differential samples comparison, and comparison with public datasets
- Combination and integration with other data (chip, miRNA…)
- Pathway analysis
- Integration of microarray data with other expression data and clinical data
We support data from most of the existing platforms (Affymetrix, Agilent…).